kimmdy_hydrolysis.reaction
reaction
Classes
| Name | Description |
|---|---|
| HydrolysisReaction | Hydrolyses peptide bonds of the backbone. |
HydrolysisReaction
reaction.HydrolysisReaction()Hydrolyses peptide bonds of the backbone.
Methods
| Name | Description |
|---|---|
| get_steps_for_id_c_at_t | Get the steps for a given bond at a given time. |
| times_to_timespans | Transforms an array of times into a list of time intervals |
get_steps_for_id_c_at_t
reaction.HydrolysisReaction.get_steps_for_id_c_at_t(key, ttime)Get the steps for a given bond at a given time.
The bond is identified by the atom id of the C atom.
times_to_timespans
reaction.HydrolysisReaction.times_to_timespans(times)Transforms an array of times into a list of time intervals times are an array of times at which the SASA was calculated timespans are the time intervals between those times as tuples of (start, end)